[us-commits] [ehb54/ultrascan3] a7d185: Eigen 3.4.0 template library for fitting

ehb54 noreply at github.com
Tue Feb 13 19:13:25 MST 2024 

  Branch: refs/heads/somo-dev
  Home:   https://github.com/ehb54/ultrascan3
  Commit: a7d18586d35c010c258e1304abc6cfadcab0b547
      https://github.com/ehb54/ultrascan3/commit/a7d18586d35c010c258e1304abc6cfadcab0b547
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2024-02-13 (Tue, 13 Feb 2024)

  Changed paths:
    A us_somo/develop/include/Eigen/Cholesky
    A us_somo/develop/include/Eigen/CholmodSupport
    A us_somo/develop/include/Eigen/Core
    A us_somo/develop/include/Eigen/Dense
    A us_somo/develop/include/Eigen/Eigen
    A us_somo/develop/include/Eigen/Eigenvalues
    A us_somo/develop/include/Eigen/Geometry
    A us_somo/develop/include/Eigen/Householder
    A us_somo/develop/include/Eigen/IterativeLinearSolvers
    A us_somo/develop/include/Eigen/Jacobi
    A us_somo/develop/include/Eigen/KLUSupport
    A us_somo/develop/include/Eigen/LU
    A us_somo/develop/include/Eigen/MetisSupport
    A us_somo/develop/include/Eigen/OrderingMethods
    A us_somo/develop/include/Eigen/PaStiXSupport
    A us_somo/develop/include/Eigen/PardisoSupport
    A us_somo/develop/include/Eigen/QR
    A us_somo/develop/include/Eigen/QtAlignedMalloc
    A us_somo/develop/include/Eigen/SPQRSupport
    A us_somo/develop/include/Eigen/SVD
    A us_somo/develop/include/Eigen/Sparse
    A us_somo/develop/include/Eigen/SparseCholesky
    A us_somo/develop/include/Eigen/SparseCore
    A us_somo/develop/include/Eigen/SparseLU
    A us_somo/develop/include/Eigen/SparseQR
    A us_somo/develop/include/Eigen/StdDeque
    A us_somo/develop/include/Eigen/StdList
    A us_somo/develop/include/Eigen/StdVector
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    A us_somo/develop/include/Eigen/UmfPackSupport
    A us_somo/develop/include/Eigen/src/Cholesky/LDLT.h
    A us_somo/develop/include/Eigen/src/Cholesky/LLT.h
    A us_somo/develop/include/Eigen/src/Cholesky/LLT_LAPACKE.h
    A us_somo/develop/include/Eigen/src/CholmodSupport/CholmodSupport.h
    A us_somo/develop/include/Eigen/src/Core/ArithmeticSequence.h
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    A us_somo/develop/include/Eigen/src/Core/PlainObjectBase.h
    A us_somo/develop/include/Eigen/src/Core/Product.h
    A us_somo/develop/include/Eigen/src/Core/ProductEvaluators.h
    A us_somo/develop/include/Eigen/src/Core/Random.h
    A us_somo/develop/include/Eigen/src/Core/Redux.h
    A us_somo/develop/include/Eigen/src/Core/Ref.h
    A us_somo/develop/include/Eigen/src/Core/Replicate.h
    A us_somo/develop/include/Eigen/src/Core/Reshaped.h
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    A us_somo/develop/include/Eigen/src/Core/Select.h
    A us_somo/develop/include/Eigen/src/Core/SelfAdjointView.h
    A us_somo/develop/include/Eigen/src/Core/SelfCwiseBinaryOp.h
    A us_somo/develop/include/Eigen/src/Core/Solve.h
    A us_somo/develop/include/Eigen/src/Core/SolveTriangular.h
    A us_somo/develop/include/Eigen/src/Core/SolverBase.h
    A us_somo/develop/include/Eigen/src/Core/StableNorm.h
    A us_somo/develop/include/Eigen/src/Core/StlIterators.h
    A us_somo/develop/include/Eigen/src/Core/Stride.h
    A us_somo/develop/include/Eigen/src/Core/Swap.h
    A us_somo/develop/include/Eigen/src/Core/Transpose.h
    A us_somo/develop/include/Eigen/src/Core/Transpositions.h
    A us_somo/develop/include/Eigen/src/Core/TriangularMatrix.h
    A us_somo/develop/include/Eigen/src/Core/VectorBlock.h
    A us_somo/develop/include/Eigen/src/Core/VectorwiseOp.h
    A us_somo/develop/include/Eigen/src/Core/Visitor.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX512/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX512/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX512/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/AVX512/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
    A us_somo/develop/include/Eigen/src/Core/arch/AltiVec/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/CUDA/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/BFloat16.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/ConjHelper.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/Half.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/Settings.h
    A us_somo/develop/include/Eigen/src/Core/arch/Default/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/GPU/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/GPU/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/GPU/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/HIP/hcc/math_constants.h
    A us_somo/develop/include/Eigen/src/Core/arch/MSA/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/MSA/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/MSA/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/NEON/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
    A us_somo/develop/include/Eigen/src/Core/arch/NEON/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/NEON/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/NEON/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/SSE/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/SSE/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/SSE/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/SSE/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/SVE/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/SVE/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/SVE/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/SYCL/InteropHeaders.h
    A us_somo/develop/include/Eigen/src/Core/arch/SYCL/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/SYCL/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
    A us_somo/develop/include/Eigen/src/Core/arch/SYCL/TypeCasting.h
    A us_somo/develop/include/Eigen/src/Core/arch/ZVector/Complex.h
    A us_somo/develop/include/Eigen/src/Core/arch/ZVector/MathFunctions.h
    A us_somo/develop/include/Eigen/src/Core/arch/ZVector/PacketMath.h
    A us_somo/develop/include/Eigen/src/Core/functors/AssignmentFunctors.h
    A us_somo/develop/include/Eigen/src/Core/functors/BinaryFunctors.h
    A us_somo/develop/include/Eigen/src/Core/functors/NullaryFunctors.h
    A us_somo/develop/include/Eigen/src/Core/functors/StlFunctors.h
    A us_somo/develop/include/Eigen/src/Core/functors/TernaryFunctors.h
    A us_somo/develop/include/Eigen/src/Core/functors/UnaryFunctors.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixMatrix.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixVector.h
    A us_somo/develop/include/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/Parallelizer.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointMatrixMatrix.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointMatrixVector.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointProduct.h
    A us_somo/develop/include/Eigen/src/Core/products/SelfadjointRank2Update.h
    A us_somo/develop/include/Eigen/src/Core/products/TriangularMatrixMatrix.h
    A us_somo/develop/include/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h
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    A us_somo/develop/include/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h
    A us_somo/develop/include/Eigen/src/Core/products/TriangularSolverMatrix.h
    A us_somo/develop/include/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
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    A us_somo/develop/include/Eigen/src/Core/util/BlasUtil.h
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    A us_somo/develop/include/Eigen/src/Core/util/StaticAssert.h
    A us_somo/develop/include/Eigen/src/Core/util/SymbolicIndex.h
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    A us_somo/develop/include/Eigen/src/Eigenvalues/ComplexEigenSolver.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/ComplexSchur.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/EigenSolver.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/HessenbergDecomposition.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h
    A us_somo/develop/include/Eigen/src/Eigenvalues/RealQZ.h
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    A us_somo/develop/include/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h
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    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLUImpl.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_Memory.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_Structs.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_Utils.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_column_bmod.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_column_dfs.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_pivotL.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_pruneL.h
    A us_somo/develop/include/Eigen/src/SparseLU/SparseLU_relax_snode.h
    A us_somo/develop/include/Eigen/src/SparseQR/SparseQR.h
    A us_somo/develop/include/Eigen/src/StlSupport/StdDeque.h
    A us_somo/develop/include/Eigen/src/StlSupport/StdList.h
    A us_somo/develop/include/Eigen/src/StlSupport/StdVector.h
    A us_somo/develop/include/Eigen/src/StlSupport/details.h
    A us_somo/develop/include/Eigen/src/SuperLUSupport/SuperLUSupport.h
    A us_somo/develop/include/Eigen/src/UmfPackSupport/UmfPackSupport.h
    A us_somo/develop/include/Eigen/src/misc/Image.h
    A us_somo/develop/include/Eigen/src/misc/Kernel.h
    A us_somo/develop/include/Eigen/src/misc/RealSvd2x2.h
    A us_somo/develop/include/Eigen/src/misc/blas.h
    A us_somo/develop/include/Eigen/src/misc/lapack.h
    A us_somo/develop/include/Eigen/src/misc/lapacke.h
    A us_somo/develop/include/Eigen/src/misc/lapacke_mangling.h
    A us_somo/develop/include/Eigen/src/plugins/ArrayCwiseBinaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/ArrayCwiseUnaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/BlockMethods.h
    A us_somo/develop/include/Eigen/src/plugins/CommonCwiseBinaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/CommonCwiseUnaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/IndexedViewMethods.h
    A us_somo/develop/include/Eigen/src/plugins/MatrixCwiseBinaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/MatrixCwiseUnaryOps.h
    A us_somo/develop/include/Eigen/src/plugins/ReshapedMethods.h

  Log Message:
  -----------
  Eigen 3.4.0 template library for fitting


  Commit: b2b513fb3e5967f341996a9f0a0b4127fef0f482
      https://github.com/ehb54/ultrascan3/commit/b2b513fb3e5967f341996a9f0a0b4127fef0f482
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2024-02-13 (Tue, 13 Feb 2024)

  Changed paths:
    M us_somo/develop/include/us_gzip.h
    M us_somo/develop/include/us_math.h
    M us_somo/develop/src/us_gzip.cpp
    M us_somo/develop/src/us_hydrodyn_grpy.cpp

  Log Message:
  -----------
  minor mods to bypass Eigen template library clobbers


  Commit: 3bde7ec8653af7308aeedc87baa1e7e4bb343fb3
      https://github.com/ehb54/ultrascan3/commit/3bde7ec8653af7308aeedc87baa1e7e4bb343fb3
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2024-02-13 (Tue, 13 Feb 2024)

  Changed paths:
    A us_somo/develop/include/us_eigen.h
    A us_somo/develop/src/us_eigen.cpp

  Log Message:
  -----------
  us_eigen : Eigen template library wrapper


  Commit: 4c3b79902fa1389795f16989c04a6a4d8518298a
      https://github.com/ehb54/ultrascan3/commit/4c3b79902fa1389795f16989c04a6a4d8518298a
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2024-02-13 (Tue, 13 Feb 2024)

  Changed paths:
    M us_somo/develop/libus_somo.pro

  Log Message:
  -----------
  Eigen template library wrapper


  Commit: 228a76bf115762b53000cc0953e4083c565a8a7d
      https://github.com/ehb54/ultrascan3/commit/228a76bf115762b53000cc0953e4083c565a8a7d
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2024-02-13 (Tue, 13 Feb 2024)

  Changed paths:
    M us_somo/develop/include/us_hydrodyn_mals_saxs.h
    M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
    M us_somo/develop/src/us_hydrodyn_mals_saxs_gui.cpp
    M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_scale.cpp
    M us_somo/develop/src/us_hydrodyn_mals_saxs_plots.cpp

  Log Message:
  -----------
  mals+saxs : scale fit


Compare: https://github.com/ehb54/ultrascan3/compare/45b75dcd40c9...228a76bf1157

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